#geneName	name	chrom	strand	txStart	txEnd	cdsStart	cdsEnd	exonCount	exonStarts	exonEnds
LMP-2A	K15	chrEBV(B_95_8_Raji)	1	58	166458	58	166458	9	58,360,540,871,1026,1280,1574,5408,166040,	272,458,788,951,1196,1495,1682,5856,166458,
LMP-2B	LMP-2B	chrEBV(B_95_8_Raji)	1	58	166458	59	166458	9	58,360,540,871,1026,1280,1574,5408,169294,	272,458,788,951,1196,1495,1682,5856,169448,
BNRF1	ORF75	chrEBV(B_95_8_Raji)	1	1691	5856	1736	5692	1	1691,	5692,
EBER-1	Non-coding	chrEBV(B_95_8_Raji)	1	6629	6795	6629	6795	1	6629,	6795,
EBER-2	Non-coding	chrEBV(B_95_8_Raji)	1	6956	7128	6956	7128	1	6956,	7128,
oriP	Latency-origin-of-replication	chrEBV(B_95_8_Raji)	1	7315	9312	7315	9312	1	7315,	9312,
BCRF1	vIL-10	chrEBV(B_95_8_Raji)	1	9631	10262	9675	10187	1	9631,	10262,
EBNA-LP	latency-protein	chrEBV(B_95_8_Raji)	1	14384	37744	14409	35694	19	14384,14559,14701,17626,17773,20698,20845,23770,23917,26842,26989,29914,30061,32986,33133,35473,35590,36098,37564,	14410,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,36156,37744,
EBNA-2	latency-protein	chrEBV(B_95_8_Raji)	1	11336	37744	36216	37679	1	11336,11626,14559,14701,17626,17773,20698,20845,23770,23917,26842,26989,29914,30061,32986,33133,35473,35590,36098,	11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,37744,
BHLF1	BHLF1	chrEBV(B_95_8_Raji)	0	38014	40529	38287	40269	1	38014,	40529,
oriLyt	Lytic-origin-of-replication-left	chrEBV(B_95_8_Raji)	1	40301	41293	40301	41293	1	40301,	41293,
BHRF1	gb|ABB89223.1|	chrEBV(B_95_8_Raji)	1	41471	43251	42088	42663	1	41471,	43251,
BFLF2	ORF69	chrEBV(B_95_8_Raji)	0	43691	44793	43691	44647	1	43691,	44793,
BFLF1	ORF68	chrEBV(B_95_8_Raji)	0	43691	46280	44660	46237	1	43691,	46280,
BFRF1A	ORF67A	chrEBV(B_95_8_Raji)	1	46236	49786	46236	46643	1	46236,	49786,
BFRF1	ORF67	chrEBV(B_95_8_Raji)	1	46544	49786	46603	47613	1	46544,	49786,
BFRF2	ORF66	chrEBV(B_95_8_Raji)	1	47520	49786	47520	49295	1	47520,	49786,
BFRF3	ORF65	chrEBV(B_95_8_Raji)	1	49219	49786	49219	49749	1	49219,	49786,
BPLF1	ORF64	chrEBV(B_95_8_Raji)	0	49775	59904	49790	59239	1	49775,	59904,
BOLF1	ORF63	chrEBV(B_95_8_Raji)	0	49775	63034	59232	62951	1	49775,	63034,
BORF1	ORF62	chrEBV(B_95_8_Raji)	1	62729	66600	62950	64044	1	62729,	66600,
BORF2	ORF61	chrEBV(B_95_8_Raji)	1	63881	66600	64119	66599	1	63881,	66600,
BaRF1	ORF60	chrEBV(B_95_8_Raji)	1	66516	69916	66612	67520	1	66516,	69916,
BMRF1	ORF59	chrEBV(B_95_8_Raji)	1	67552	69916	67611	68825	1	67552,	69916,
BMRF2	ORF58	chrEBV(B_95_8_Raji)	1	68491	69916	68830	69903	1	68491,	69916,
BSLF2/BMLF1	ORF57	chrEBV(B_95_8_Raji)	0	70454	72068	70455	72000	2	70454,71940,	71833,72068,
BSLF1	ORF56	chrEBV(B_95_8_Raji)	0	70454	74593	71969	74593	1	70454,	74593,
BSRF1	ORF55	chrEBV(B_95_8_Raji)	1	74594	75316	74636	75292	1	74594,	75316,
BLLF3	ORF54	chrEBV(B_95_8_Raji)	0	75320	76231	75350	76186	1	75320,	76231,
BLRF1	ORF53	chrEBV(B_95_8_Raji)	1	76219	77129	76259	76567	1	76219,	77129,
BLRF2	ORF52	chrEBV(B_95_8_Raji)	1	76575	77129	76637	77125	1	76575,	77129,
BLLF1	ORF51	chrEBV(B_95_8_Raji)	0	77132	79904	77142	79865	1	77132,	79904,
BLLF2	BLLF2	chrEBV(B_95_8_Raji)	0	77132	77763	77279	77725	1	77132,	77763,
EBNA-3A	latency-protein	chrEBV(B_95_8_Raji)	1	11336	82962	79955	82877	21	11336,11626,14554,14701,17626,17773,20698,20845,23770,23917,26842,26989,29914,30061,32986,33133,35473,35590,55190,79950,80382,	11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,55361,80293,82962,
EBNA-3B	latency-protein	chrEBV(B_95_8_Raji)	1	11336	89482	83065	85959	21	11336,11626,14554,14701,17626,17773,20698,20845,23770,23917,26842,26989,29914,30061,32986,33133,35473,35590,55190,83020,83500,	11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,55361,83421,89482,
EBNA-3C	latency-protein	chrEBV(B_95_8_Raji)	1	11336	89482	86083	89135	21	11336,11626,14554,14701,17626,17773,20698,20845,23770,23917,26842,26989,29914,30061,32986,33133,35473,35590,55190,86076,86517,	11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,55361,86442,89482,
BZLF2	envelope-glycoprotein-gp42	chrEBV(B_95_8_Raji)	0	89157	89828	89157	89828	1	89157,	89828,
BZLF1	Zta	chrEBV(B_95_8_Raji)	0	89838	90906	89922	90867	3	89838,90138,90367,	90053,90242,90906,
BRLF1	Rta	chrEBV(B_95_8_Raji)	0	89838	93893	91078	92895	3	89838,90138,90367,	90053,90242,92897,
BRRF1	ORF49	chrEBV(B_95_8_Raji)	1	92728	93827	92894	93826	1	92728,	93827,
BRRF2	ORF48	chrEBV(B_95_8_Raji)	1	93955	95631	94014	95627	1	93955,	95631,
EBNA-1.2:EBNA-1-latency-I	EBNA-1.2-QUK	chrEBV(B_95_8_Raji)	1	50134	97654	95662	97587	3	50134,55190,95654,	50170,55361,97654,
BKRF2	ORF47	chrEBV(B_95_8_Raji)	1	97617	99504	97670	98083	1	97617,	99504,
BKRF3	ORF46	chrEBV(B_95_8_Raji)	1	98065	99504	98065	98832	1	98065,	99504,
BKRF4	ORF45	chrEBV(B_95_8_Raji)	1	98846	99504	98846	99499	1	98846,	99504,
BBLF4	ORF44	chrEBV(B_95_8_Raji)	0	99537	101971	99542	101971	1	99537,	101971,
BBRF1	ORF43	chrEBV(B_95_8_Raji)	1	101588	104502	101916	103757	1	101588,	104502,
BBRF2	ORF42	chrEBV(B_95_8_Raji)	1	103660	104502	103660	104496	1	103660,	104502,
BBLF2/BBLF3	ORF40	chrEBV(B_95_8_Raji)	0	104403	106750	104493	106750	2	104403,105227,	105098,106750,
BBRF3	ORF49	chrEBV(B_95_8_Raji)	1	106693	108075	106849	108066	1	106693,	108075,
BBLF1	ORF38	chrEBV(B_95_8_Raji)	0	108459	109043	108459	108686	1	108459,	109043,
BGLF5	ORF37	chrEBV(B_95_8_Raji)	0	108459	110053	108641	110053	1	108459,	110053,
BGLF4	ORF36	chrEBV(B_95_8_Raji)	0	108459	111326	110037	111326	1	108459,	111326,
BGLF3.5	ORF35	chrEBV(B_95_8_Raji)	0	108459	111829	111205	111666	1	108459,	111829,
BGLF3	ORF34	chrEBV(B_95_8_Raji)	0	108459	112825	111653	112651	1	108459,	112825,
BGRF1/BDRF1	ORF29	chrEBV(B_95_8_Raji)	1	112650	118064	112650	118063	2	112650,116927,	113585,118064,
BGLF2	ORF33	chrEBV(B_95_8_Raji)	0	113191	114641	113575	114585	1	113191,	114641,
BGLF1	ORF32	chrEBV(B_95_8_Raji)	0	113191	116144	114563	116086	1	113191,	116144,
BDLF4	ORF31	chrEBV(B_95_8_Raji)	0	113191	116766	116056	116733	1	113191,	116766,
BDLF3.5	ORF30	chrEBV(B_95_8_Raji)	0	113191	117016	116712	116945	1	113191,	117016,
BDLF3	ORF28	chrEBV(B_95_8_Raji)	0	118066	118816	118074	118778	1	118066,	118816,
BDLF2	ORF27	chrEBV(B_95_8_Raji)	0	118066	120188	118839	120101	1	118066,	120188,
BDLF1	ORF26	chrEBV(B_95_8_Raji)	0	118066	121098	120112	121017	1	118066,	121098,
BcLF1	ORF25	chrEBV(B_95_8_Raji)	0	121019	125422	121033	125178	1	121019,	125422,
BcRF1	ORF24	chrEBV(B_95_8_Raji)	1	125073	128686	125177	127429	1	125073,	128686,
BTRF1	ORF23	chrEBV(B_95_8_Raji)	1	127416	128686	127416	128630	1	127416,	128686,
BXLF2	ORF22	chrEBV(B_95_8_Raji)	0	128608	131021	128627	130747	1	128608,	131021,
BXLF1	ORF21	chrEBV(B_95_8_Raji)	0	128608	132846	130749	132572	1	128608,	132846,
BXRF1	ORF20	chrEBV(B_95_8_Raji)	1	132571	134886	132571	133317	1	132571,	134886,
BVRF1	ORF19	chrEBV(B_95_8_Raji)	1	133013	134886	133127	134839	1	133013,	134886,
BVLF1	ORF18	chrEBV(B_95_8_Raji)	0	134632	135627	134809	135627	1	134632,	135627,
BVRF2	ORF17	chrEBV(B_95_8_Raji)	1	135432	137455	135638	137455	1	135432,	137455,
BdRF1	ORF17.5	chrEBV(B_95_8_Raji)	1	136331	137455	136418	137455	1	136331,	137455,
BILF2	membrane-glycoprotein	chrEBV(B_95_8_Raji)	0	137464	138282	137490	138236	1	137464,	138282,
LF3	LF3	chrEBV(B_95_8_Raji)	1	140570	143711	140570	143344	1	140570,	143711,
oriLytr	Lytic-origin-of-replication-left	chrEBV(B_95_8_Raji)	1	143207	144444	143207	144444	1	143207,	144444,
LF2	ORF11	chrEBV(B_95_8_Raji)	0	149025	150417	149035	150324	1	149025,	150417,
LF1	ORF10	chrEBV(B_95_8_Raji)	0	149025	151694	150285	151694	1	149025,	151694,
RPMS1	RPMS1	chrEBV(B_95_8_Raji)	1	138352	160531	150323	155552	7	138352,149581,149923,150237,155267,156846,158625,	138480,149712,150077,150348,156737,156928,160531,
BILF1	G-protein coupled receptor	chrEBV(B_95_8_Raji)	0	149025	152641	151703	152641	1	149025,	152641,
BALF5	ORF9	chrEBV(B_95_8_Raji)	0	151372	156288	153241	156288	1	151372,	156288,
BALF4	ORF8	chrEBV(B_95_8_Raji)	0	156244	158912	156291	158864	1	156244,	158912,
A73	A73	chrEBV(B_95_8_Raji)	1	155549	160531	156652	159865	4	155549,156846,158625,159781,	156737,156928,158751,160531,
BALF3	ORF7	chrEBV(B_95_8_Raji)	0	156244	160908	158851	160908	1	156244,	160908,
BARF0	BARF0	chrEBV(B_95_8_Raji)	1	159121	160536	159121	160536	1	159121,	160536,
BALF2	ORF6	chrEBV(B_95_8_Raji)	0	160550	164356	160926	164312	1	160550,	164356,
BALF1	vbcl-2b	chrEBV(B_95_8_Raji)	0	164388	164984	164397	164945	1	164388,	164984,
BARF1	BARF1	chrEBV(B_95_8_Raji)	1	165008	165712	165046	165711	1	165008,	165712,
BNLF2b	BNLF2a	chrEBV(B_95_8_Raji)	0	166483	166836	166540	166836	1	166483,	166836,
BNLF2a	BNLF2a	chrEBV(B_95_8_Raji)	0	166483	167067	166846	167028	1	166483,	167067,
LMP-1	LMP1	chrEBV(B_95_8_Raji)	0	166483	169056	167702	169016	3	166483,168584,168749,	168507,168670,169056,